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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ChIP-seq
3
RRBS
2
Hi-C
1
ATAC-seq
1
snATAC-seq
Assay category
13
DNA binding
3
DNA methylation
2
3D chromatin structure
2
DNA accessibility
Target of assay
13
histone
13
histone modification
8
broad histone mark
5
narrow histone mark
Date released
15
August, 2017
2
March, 2020
1
January, 2018
1
July, 2019
1
May, 2022
Available data
67
bigWig
60
bed narrowPeak
bam
47
bigBed narrowPeak
46
bed broadPeak
34
bed bed3+
33
bigBed broadPeak
13
tagAlign
6
tsv
3
bed bedMethyl
3
bigBed bedMethyl
2
bedpe bed3+
2
fastq
2
hic
1
txt
Organism
20
Homo sapiens
Biosample type
19
tissue
1
primary cell
Organ
40
liver
28
epithelium
28
eye
26
connective tissue
23
pancreas
20
musculature of body
9
brain
6
heart
6
vasculature
adipose tissue
5
blood vessel
5
kidney
4
bone element
4
skeleton
2
vein
1
blood
1
bodily fluid
pericardium
Project
20
AMP
Genome assembly (visualization)
20
hg19
Lab
20
AMP-T2D consortium
Audit category:
1
audit script error
files.file_type!
bam
organ_slims!
adipose tissue
pericardium
BIOSAMPLE
ASSAY
20 results
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Clear Filters
ChIP-seq
RRBS
Hi-C
ATAC-seq
snATAC-seq
tissue
skeletal muscle tissue
13
2
1
1
psoas muscle
2
primary cell
skeletal muscle cell
1
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