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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
ChIP-seq
5
total RNA-seq
1
ATAC-seq
1
RRBS
Assay category
15
DNA binding
5
Transcription
1
DNA accessibility
1
DNA methylation
Target of assay
13
histone modification
12
histone
7
broad histone mark
5
narrow histone mark
2
transcription factor
Date released
266
November, 2017
170
May, 2020
50
December, 2017
46
November, 2018
20
May, 2022
17
August, 2017
15
August, 2021
8
July, 2019
7
October, 2019
5
December, 2019
5
January, 2019
2
March, 2020
1
February, 2021
Available data
25
fastq
24
bam
23
bigWig
18
bed narrowPeak
6
bigBed narrowPeak
5
tsv
bed bed3+
1
bed bedMethyl
1
bigBed bedMethyl
Organism
22
Homo sapiens
Biosample type
17
tissue
5
cell line
Organ
140
pancreas
53
connective tissue
22
liver
17
epithelium
15
blood
15
bodily fluid
15
musculature of body
11
adipose tissue
6
spleen
Project
22
AMP
Genome assembly (visualization)
22
hg19
21
GRCh38
Lab
22
AMP-T2D consortium
Audit category:
1
inconsistent control read length
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
22 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
RRBS
tissue
liver
15
1
right lobe of liver
1
cell line
HepG2
5
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