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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ATAC-seq
6
ChIP-seq
3
Hi-C
Assay category
7
DNA accessibility
6
DNA binding
3
3D chromatin structure
Target of assay
6
histone
6
histone modification
5
broad histone mark
1
narrow histone mark
Date released
572
February, 2021
316
May, 2021
281
November, 2017
276
August, 2017
260
May, 2020
217
October, 2019
187
June, 2019
164
July, 2018
97
May, 2019
91
July, 2019
77
December, 2017
72
September, 2018
71
November, 2018
65
April, 2019
60
August, 2021
59
November, 2019
49
April, 2018
47
October, 2018
39
May, 2022
35
February, 2023
32
March, 2020
31
February, 2018
30
December, 2018
26
January, 2019
13
October, 2017
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
1
May, 2023
Available data
13
bigWig
13
fastq
12
bam
12
bed narrowPeak
6
bigBed narrowPeak
6
tagAlign
4
bed broadPeak
3
bedpe bed3+
3
cool
3
hic
Organism
16
Homo sapiens
Biosample type
13
tissue
3
primary cell
Organ
8
pancreas
6
brain
3
epithelium
1
adipose tissue
1
connective tissue
1
spleen
Project
13
AMP
3
HPAP
Genome assembly (visualization)
16
hg19
14
GRCh38
Lab
12
AMP-T2D consortium
3
Klaus Kaestner, Upenn
1
Stephen Parker, UMich
Audit category:
3
audit script error
Audit category:
3
missing controlled_by
files.file_type!
bed bed3
month_released!
January, 2018
BIOSAMPLE
ASSAY
16 results
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Clear Filters
ATAC-seq
ChIP-seq
Hi-C
tissue
brain
6
body of pancreas
4
islet of Langerhans
1
omental fat pad
1
spleen
1
primary cell
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
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