Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
116
total RNA-seq
91
ChIP-seq
48
single cell RNA-seq
1
FAIRE-seq
Assay category
164
Transcription
91
DNA binding
1
DNA accessibility
Target of assay
89
transcription factor
23
RNA binding protein
13
recombinant protein
9
chromatin remodeller
3
other context
3
other post-translational modification
Date released
574
February, 2021
316
May, 2021
261
August, 2017
260
May, 2020
217
November, 2017
208
October, 2019
164
July, 2018
97
May, 2019
91
July, 2019
77
December, 2017
72
September, 2018
65
April, 2019
62
November, 2018
60
August, 2021
59
November, 2019
49
April, 2018
47
October, 2018
45
February, 2023
39
May, 2022
32
March, 2020
31
February, 2018
30
December, 2018
26
January, 2019
23
June, 2019
13
October, 2017
7
September, 2017
5
December, 2019
5
November, 2020
3
August, 2018
3
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
1
May, 2023
Available data
265
bam
265
bigWig
164
tsv
151
fastq
101
bed narrowPeak
101
bigBed narrowPeak
9
bed bed3+
9
bed broadPeak
bigBed broadPeak
Organism
256
Homo sapiens
Biosample type
127
tissue
81
cell line
48
primary cell
Organ
154
pancreas
46
liver
39
blood
39
bodily fluid
33
epithelium
6
spleen
2
connective tissue
Project
256
AMP
Genome assembly (visualization)
264
GRCh38
256
hg19
Lab
256
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
1
inconsistent control
Audit category:
2
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
256 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ChIP-seq
single cell RNA-seq
FAIRE-seq
tissue
islet of Langerhans
116
spleen
6
liver
4
pancreas
1
cell line
HepG2
42
GM12878
39
primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
pancreatic acinar cell
5
pancreatic delta cell
4
pancreatic cell
3
+ See 10 more…
See all biosamples
Download