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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
ATAC-seq
3
Hi-C
Assay category
8
DNA accessibility
3
3D chromatin structure
Date released
8
February, 2021
2
March, 2020
1
October, 2019
Available data
130
bam
bigWig
69
bed narrowPeak
58
tsv
54
bigBed narrowPeak
11
bed broadPeak
11
bigBed broadPeak
10
bed bed3+
4
tagAlign
3
hic
2
bedpe bed3+
2
fastq
2
hdf5
1
tar
Organism
11
Homo sapiens
Biosample type
8
cell line
2
primary cell
1
tissue
Organ
51
pancreas
28
eye
26
epithelium
22
connective tissue
13
heart
12
bone element
12
skeleton
12
vasculature
11
blood vessel
8
artery
8
liver
6
limb
6
musculature of body
5
kidney
3
adipose tissue
3
brain
2
vein
1
embryo
1
pericardium
Project
11
AMP
Genome assembly (visualization)
43
GRCh38
11
hg19
Lab
11
AMP-T2D consortium
Audit category:
1
audit script error
files.file_type!
bigWig
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
11 results
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ATAC-seq
Hi-C
cell line
smooth muscle cell of the coronary artery
8
primary cell
endothelial cell of umbilical vein
2
tissue
aorta
1
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