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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
23
candidate regulatory elements
21
target gene predictions
17
chromatin state
14
histone modifications
12
binding sites
10
accessible chromatin
6
eQTL
3
Fine-mapped variants
3
variant allelic effects
1
caQTL
Date released
46
September, 2022
21
February, 2021
11
February, 2024
8
August, 2021
6
March, 2020
5
June, 2020
3
August, 2017
3
May, 2021
2
May, 2020
2
May, 2022
1
February, 2020
1
November, 2021
1
October, 2022
Available data
100
bed bed3+
14
bed bed9
bigWig
4
tsv
1
bam
1
bigBed bed9
Organism
110
Homo sapiens
Biosample type
51
tissue
29
primary cell
26
cell line
4
in vitro differentiated cells
Organ
433
epithelium
402
brain
351
kidney
351
musculature of body
332
connective tissue
300
lung
272
intestine
223
limb
217
bodily fluid
207
heart
206
blood
203
embryo
194
skin of body
177
vasculature
167
large intestine
142
extraembryonic component
140
blood vessel
129
pancreas
stomach
110
liver
84
mammary gland
81
small intestine
79
uterus
76
prostate gland
75
bone element
71
eye
70
placenta
65
adrenal gland
64
adipose tissue
64
penis
62
lymph node
61
ureter
51
artery
48
thymus
44
gonad
41
spinal cord
38
esophagus
31
spleen
23
lymphoid tissue
23
testis
20
nerve
20
ovary
thyroid gland
20
vein
17
mouth
14
bronchus
13
lymphatic vessel
11
bone marrow
11
breast
11
pituitary gland
10
skeleton
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
109
AMP
1
ENCODE
Genome assembly (visualization)
110
hg19
37
GRCh38
2
hg18
files.file_type!
bigWig
organ_slims!
stomach
thyroid gland
BIOSAMPLE
TYPE
110 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
histone modifications
binding sites
accessible chromatin
eQTL
Fine-mapped variants
variant allelic effects
caQTL
tissue
liver
13
10
9
2
1
2
5
1
right lobe of liver
2
1
1
1
3
primary cell
hepatocyte
1
3
1
4
1
1
2
endothelial cell of hepatic sinusoid
6
4
hepatic stellate cell
1
1
1
1
1
Liver fetal (hepatocyte)
1
cell line
HepG2
2
3
2
5
2
1
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte
2
1
1
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