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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
ATAC-seq
20
total RNA-seq
2
Hi-C
1
ChIP-seq
Assay category
26
DNA accessibility
20
Transcription
2
3D chromatin structure
1
DNA binding
Target of assay
10
histone
10
histone modification
broad histone mark
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
574
February, 2021
257
November, 2017
233
May, 2020
200
May, 2021
168
June, 2019
164
July, 2018
155
August, 2017
91
July, 2019
71
November, 2018
49
April, 2018
49
November, 2019
47
December, 2017
46
October, 2019
45
February, 2023
42
August, 2021
40
September, 2018
39
May, 2022
30
December, 2018
27
March, 2020
19
January, 2019
17
October, 2018
15
February, 2018
7
October, 2017
7
September, 2017
6
November, 2020
5
April, 2019
5
December, 2019
5
May, 2019
3
August, 2018
3
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
1
May, 2023
Available data
47
bam
27
bed narrowPeak
21
bigWig
20
tsv
2
bedpe bed3+
2
hic
Organism
49
Homo sapiens
Biosample type
40
tissue
5
in vitro differentiated cells
4
cell line
Organ
43
pancreas
4
epithelium
1
adipose tissue
1
connective tissue
Project
49
AMP
Genome assembly (visualization)
49
hg19
47
GRCh38
Lab
49
AMP-T2D consortium
Audit category:
10
inconsistent ontology term
files.file_type!
ibed
target.investigated_as!
broad histone mark
narrow histone mark
BIOSAMPLE
ASSAY
49 results
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Clear Filters
ATAC-seq
total RNA-seq
Hi-C
ChIP-seq
tissue
islet of Langerhans
19
19
1
adipose tissue(adipose white tissue)
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
cell line
EndoC_BH1
1
1
1
1
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