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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
117
ChIP-seq
23
ATAC-seq
2
total RNA-seq
Assay category
117
DNA binding
23
DNA accessibility
2
Transcription
Target of assay
114
histone
114
histone modification
64
broad histone mark
50
narrow histone mark
3
control
Date released
124
May, 2021
18
May, 2022
Available data
220
bigWig
198
bam
132
bed narrowPeak
tsv
84
tagAlign
18
fastq
2
bed bed3+
Organism
142
Homo sapiens
Biosample type
119
primary cell
18
tissue
5
in vitro differentiated cells
Organ
18
pancreas
Project
84
T1D
58
AMP
Genome assembly (visualization)
142
hg19
84
GRCh38
Lab
1619
AMP-T2D consortium
142
Kyle Gaulton, UCSD
20
Karen Mohlke, UNC
17
Bing Ren, UCSD
7
Struan F.A. Grant, CHOP
3
Klaus Kaestner, Upenn
1
Katalin Susztak, Upenn
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
files.file_type!
tsv
lab.title!
Maike Sander, UCSD
BIOSAMPLE
ASSAY
142 results
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ChIP-seq
ATAC-seq
total RNA-seq
primary cell
monocyte
84
CD8-positive, alpha-beta T cell
33
2
tissue
islet of Langerhans
18
in vitro differentiated cells
embryonic stem cell
5
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