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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1661
candidate regulatory elements
1352
target gene predictions
976
histone modifications
888
accessible chromatin
816
binding sites
122
variant allelic effects
40
chromatin state
10
eQTL
6
caQTL
3
hQTL
2
meQTL
2
pQTL
2
variant to gene
1
other
1
sQTL
Date released
2404
February, 2021
1668
September, 2022
333
November, 2021
293
February, 2024
286
June, 2020
285
May, 2021
133
May, 2020
99
October, 2022
65
January, 2020
56
January, 2021
51
August, 2021
45
March, 2020
41
November, 2022
34
August, 2017
26
February, 2023
19
April, 2020
15
May, 2022
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5882
bed bed3+
862
bed bed9
524
bigWig
92
tsv
38
bigBed bed9
34
bed bed9+
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5836
Homo sapiens
Biosample type
2123
cell line
1820
tissue
1589
primary cell
345
in vitro differentiated cells
4
stem cell
Organ
545
epithelium
329
connective tissue
309
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
173
limb
168
heart
165
skin of body
157
pancreas
157
vasculature
137
large intestine
117
blood vessel
112
extraembryonic component
99
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
42
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
25
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
13
mouth
nerve
11
bone marrow
11
pituitary gland
9
breast
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5471
AMP
333
ENCODE
58
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5882
hg19
787
GRCh38
1
hg18
month_released!
November, 2019
organ_slims!
nerve
tongue
BIOSAMPLE
TYPE
5882 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
variant allelic effects
chromatin state
eQTL
caQTL
hQTL
meQTL
pQTL
variant to gene
other
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
1
2
H1-hESC
1
39
1
1
2
K562
7
23
1
1
2
1
MCF-7
9
6
2
1
3
+ See 760 more…
tissue
heart
37
20
1
4
1
2
stomach
40
21
1
3
kidney
29
14
2
10
1
1
1
brain
29
16
3
2
1
1
muscle of arm
33
16
1
1
+ See 215 more…
primary cell
monocyte
2
86
18
1
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
1
15
2
2
1
1
+ See 329 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 103 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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