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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
ATAC-seq
Assay category
16
DNA accessibility
Date released
10
February, 2023
6
February, 2021
Available data
2760
bam
2726
bigWig
1403
bed narrowPeak
1291
tsv
989
fastq
963
bigBed narrowPeak
297
bed broadPeak
262
bigBed broadPeak
243
bed bed3+
139
tagAlign
19
bed bedMethyl
19
bigBed bedMethyl
17
bedpe bed3+
16
hic
12
bed bed3
5
hdf5
4
bed bedgraph
4
tar
2
ibed
1
tagAlign bed3+
1
txt
Organism
16
Homo sapiens
Biosample type
9
in vitro differentiated cells
5
tissue
1
cell line
1
primary cell
Organ
10
connective tissue
4
bone element
4
skeleton
1
brain
1
liver
Project
16
AMP
Genome assembly (visualization)
16
hg19
2
GRCh38
Lab
16
AMP-T2D consortium
3
Struan F.A. Grant, CHOP
Audit category:
1
inconsistent replicate
month_released!
August, 2021
BIOSAMPLE
ASSAY
16 results
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ATAC-seq
in vitro differentiated cells
chondrocyte
5
adipocyte
4
tissue
acetabular part of hip bone
1
brain
1
ilium
1
ischium
1
pubis
1
cell line
HepG2
1
primary cell
osteoblast
1
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