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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ChIP-seq
1
RRBS
Assay category
6
DNA binding
1
DNA methylation
Target of assay
2
RNA binding protein
2
control
2
histone
2
histone modification
2
narrow histone mark
2
transcription factor
Date released
6
November, 2017
1
July, 2019
Available data
159
bam
153
bigWig
97
bed narrowPeak
82
bigBed narrowPeak
58
tsv
16
bed broadPeak
16
bigBed broadPeak
12
bed bed3+
6
fastq
4
tagAlign
3
hic
2
bedpe bed3+
2
hdf5
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
Organism
7
Homo sapiens
Biosample type
7
primary cell
Organ
391
liver
365
pancreas
179
epithelium
74
connective tissue
54
blood
54
bodily fluid
21
adipose tissue
19
brain
19
embryo
14
spleen
7
vasculature
4
kidney
3
blood vessel
3
musculature of body
2
heart
1
eye
1
pericardium
Project
7
AMP
Genome assembly (visualization)
7
hg19
5
GRCh38
Lab
7
AMP-T2D consortium
lab.title!
Maike Sander, UCSD
BIOSAMPLE
ASSAY
7 results
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ChIP-seq
RRBS
primary cell
choroid plexus epithelial cell
3
1
brain microvascular endothelial cell
3
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