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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
DNase-seq
6
ChIP-seq
Assay category
22
DNA accessibility
6
DNA binding
Target of assay
3
RNA binding protein
3
histone
3
histone modification
3
narrow histone mark
3
transcription factor
Date released
20
June, 2019
6
November, 2017
2
November, 2018
Available data
159
bigWig
155
bam
141
bed narrowPeak
65
bigBed narrowPeak
43
tagAlign
37
bed broadPeak
28
bigBed broadPeak
25
bed bed3+
17
fastq
tsv
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
1
tagAlign bed3+
Organism
28
Homo sapiens
Biosample type
17
tissue
11
primary cell
Organ
71
kidney
63
liver
36
limb
33
musculature of body
28
brain
27
heart
18
ureter
16
epithelium
16
vasculature
12
blood vessel
8
connective tissue
5
pancreas
4
artery
eye
4
vein
2
adipose tissue
2
nerve
1
spleen
Project
28
AMP
Genome assembly (visualization)
38
GRCh38
28
hg19
Lab
28
AMP-T2D consortium
files.file_type!
tsv
organ_slims!
eye
BIOSAMPLE
ASSAY
28 results
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DNase-seq
ChIP-seq
tissue
brain
14
frontal cortex
2
cerebellum (Hemisphere)
1
primary cell
astrocyte of the cerebellum
1
2
brain microvascular endothelial cell
1
2
choroid plexus epithelial cell
1
2
astrocyte of the hippocampus
1
brain pericyte
1
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