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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
176
DNase-seq
77
ChIP-seq
Assay category
176
DNA accessibility
77
DNA binding
Target of assay
49
transcription factor
28
histone
28
histone modification
14
broad histone mark
14
narrow histone mark
9
RNA binding protein
5
chromatin remodeller
1
other context
1
other post-translational modification
Date released
164
June, 2019
64
November, 2017
15
August, 2017
9
November, 2018
October, 2019
1
November, 2020
Available data
2809
bigWig
2791
bam
1409
bed narrowPeak
1386
tsv
1008
fastq
893
bigBed narrowPeak
289
bed broadPeak
253
bigBed broadPeak
242
bed bed3+
198
tagAlign
19
bed bedMethyl
19
bigBed bedMethyl
18
bedpe bed3+
18
hic
12
bed bed3
7
bed bedgraph
4
hdf5
4
txt
3
cool
3
tar
2
ibed
1
bedpe
Organism
253
Homo sapiens
Biosample type
156
tissue
58
cell line
38
primary cell
1
in vitro differentiated cells
Organ
71
kidney
63
liver
33
musculature of body
32
limb
28
brain
27
heart
18
ureter
12
epithelium
10
vasculature
8
connective tissue
6
blood vessel
4
eye
4
pancreas
2
adipose tissue
2
artery
1
spleen
Project
253
AMP
Genome assembly (visualization)
260
GRCh38
253
hg19
Lab
253
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
13
inconsistent control read length
1
inconsistent assembly
month_released!
October, 2019
organ_slims!
lung
BIOSAMPLE
ASSAY
253 results
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Clear Filters
DNase-seq
ChIP-seq
tissue
muscle of arm
17
heart
16
brain
14
kidney
13
muscle of leg
13
+ See 26 more…
cell line
HepG2
58
primary cell
skeletal muscle myoblast
1
13
astrocyte of the cerebellum
1
2
brain microvascular endothelial cell
1
2
choroid plexus epithelial cell
1
2
cardiac fibroblast
2
+ See 13 more…
in vitro differentiated cells
adipocyte
1
See all biosamples
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