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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
142
ChIP-seq
Assay category
142
DNA binding
Target of assay
227
histone
227
histone modification
142
narrow histone mark
85
broad histone mark
9
transcription factor
control
Date released
41
May, 2021
40
October, 2019
27
May, 2020
15
August, 2017
9
August, 2021
9
November, 2017
1
October, 2017
Available data
409
bigWig
398
bed narrowPeak
387
bam
142
tagAlign
133
bigBed narrowPeak
109
fastq
29
bed broadPeak
14
bigBed broadPeak
13
bed bed3+
1
tagAlign bed3+
Organism
140
Homo sapiens
Biosample type
82
tissue
47
primary cell
8
in vitro differentiated cells
5
cell line
Organ
36
brain
34
liver
5
musculature of body
5
pancreas
3
epithelium
1
adipose tissue
1
connective tissue
1
pituitary gland
Project
102
AMP
40
T1D
Genome assembly (visualization)
142
hg19
135
GRCh38
Lab
102
AMP-T2D consortium
40
Kyle Gaulton, UCSD
Audit category:
1
missing controlled_by
Audit category:
5
inconsistent control read length
month_released!
December, 2019
target.investigated_as!
control
BIOSAMPLE
ASSAY
142 results
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Clear Filters
ChIP-seq
tissue
liver
27
skeletal muscle tissue
5
angular gyrus
2
islet of Langerhans
2
pancreas
2
+ See 43 more…
primary cell
monocyte
40
skeletal muscle myoblast
5
hepatocyte
2
in vitro differentiated cells
neural progenitor cell
7
pancreatic PP cell
1
cell line
HepG2
5
See all biosamples
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