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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 17ChIP-seq
  • 1DNase-seq
Assay category
  • 17DNA binding
  • 1DNA accessibility
Target of assay
  • 8histone
  • 8histone modification
  • 8transcription factor
  • 4broad histone mark
  • 3RNA binding protein
  • 3narrow histone mark
  • 1control
Date released
  • 10August, 2017
  • 5November, 2017
  • 3October, 2017
Available data
  • 18bam
  • 18bigWig
  • 18fastq
  • 17bed narrowPeak
  • 8bigBed narrowPeak
  • 7bed broadPeak
  • 5bigBed broadPeak
  • 4bed bed3+
  • 4tagAlign
Organism
  • 18Homo sapiens
Biosample type
  • 7tissue
  • 5in vitro differentiated cells
  • 3cell line
  • 3primary cell
Organ
  • 5brain
  • 5connective tissue
  • 4liver
  • 3pancreas
  • 2epithelium
  • 2vasculature
  • 1blood vessel
Project
  • 18AMP
Genome assembly (visualization)
  • 18hg19
  • 15GRCh38
Lab
  • 18AMP-T2D consortium
Audit category:
  • 3missing controlled_by
Audit category:
  • 1inconsistent control read length
BIOSAMPLE
ASSAY

18 results

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Clear Filters
ChIP-seq
DNase-seq
tissue
brain3
islet of Langerhans3
liver1
in vitro differentiated cells
adipocyte5
cell line
HepG23
primary cell
brain microvascular endothelial cell1
choroid plexus epithelial cell1
skeletal muscle myoblast1
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