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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 107ChIP-seq
  • 26ATAC-seq
  • 26single cell RNA-seq
  • 15total RNA-seq
Assay category
  • 107DNA binding
  • 41Transcription
  • 26DNA accessibility
Target of assay
  • 104transcription factor
  • 18RNA binding protein
  • 3chromatin remodeller
Date released
  • 35November, 2017
  • 28December, 2018
  • 18May, 2022
  • 17April, 2018
  • 15February, 2018
  • 14November, 2018
  • 13October, 2018
  • 9August, 2017
  • 8January, 2019
  • 8July, 2018
  • 6October, 2017
  • 2December, 2017
  • 1June, 2018
Available data
  • 174bam
  • 174fastq
  • 156bigWig
  • 126bed narrowPeak
  • 102bigBed narrowPeak
  • 41tsv
  • 2bed bed3+
Organism
  • 174Homo sapiens
Biosample type
  • 82cell line
  • 51tissue
  • 26primary cell
  • 15in vitro differentiated cells
Organ
  • 48pancreas
  • 43blood
  • 43bodily fluid
  • 42liver
  • 18epithelium
  • 14adipose tissue
  • 14connective tissue
  • 4embryo
  • 4spleen
Project
  • 174AMP
Genome assembly (visualization)
  • 174hg19
  • 159GRCh38
Lab
  • 156AMP-T2D consortium
  • 18Kyle Gaulton, UCSD
Audit category:
  • 7missing controlled_by
BIOSAMPLE
ASSAY

174 results

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Clear Filters
ChIP-seq
ATAC-seq
single cell RNA-seq
total RNA-seq
cell line
GM1287843
HepG239
tissue
islet of Langerhans18
body of pancreas84
white adipose tissue7
omental fat pad31
spleen31
primary cell
mesenchymal cell4
pancreatic alpha cell4
pancreatic beta cell4
pancreatic cell4
pancreatic delta cell3
in vitro differentiated cells
pancreatic endoderm4
definitive endodermal cell2
embryonic stem cell2
endocrine cell2
posterior foregut2
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