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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
118
total RNA-seq
48
single cell RNA-seq
45
ChIP-seq
Assay category
166
Transcription
45
DNA binding
Target of assay
30
histone
30
histone modification
19
broad histone mark
15
transcription factor
11
RNA binding protein
11
narrow histone mark
Date released
574
February, 2021
316
May, 2021
281
November, 2017
276
August, 2017
260
May, 2020
217
October, 2019
187
June, 2019
164
July, 2018
97
May, 2019
91
July, 2019
77
December, 2017
72
September, 2018
71
November, 2018
65
April, 2019
59
November, 2019
56
August, 2021
49
April, 2018
47
October, 2018
42
February, 2023
39
May, 2022
32
March, 2020
31
February, 2018
30
December, 2018
26
January, 2019
13
October, 2017
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
1
May, 2023
Available data
211
bam
211
bigWig
166
tsv
83
fastq
45
bed narrowPeak
45
bigBed narrowPeak
Organism
211
Homo sapiens
Biosample type
161
tissue
50
primary cell
Organ
195
pancreas
35
epithelium
7
connective tissue
5
adipose tissue
Project
211
AMP
Genome assembly (visualization)
211
GRCh38
211
hg19
Lab
211
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
1
inconsistent control read length
lab.title!
Struan F.A. Grant, CHOP
target.investigated_as!
nucleotide modification
BIOSAMPLE
ASSAY
211 results
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Clear Filters
total RNA-seq
single cell RNA-seq
ChIP-seq
tissue
islet of Langerhans
116
body of pancreas
25
endocrine pancreas
14
omental fat pad
3
subcutaneous adipose tissue
2
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primary cell
pancreatic beta cell
9
pancreatic acinar cell
2
5
pancreatic alpha cell
7
pancreatic delta cell
4
pancreatic cell
3
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