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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
total RNA-seq
9
ChIP-seq
Assay category
10
Transcription
9
DNA binding
Target of assay
5
histone
5
histone modification
4
narrow histone mark
3
transcription factor
1
broad histone mark
1
control
Date released
February, 2018
9
December, 2017
8
August, 2021
2
May, 2021
Available data
19
bam
18
bigWig
10
tsv
9
fastq
8
bed narrowPeak
3
bed bed3+
Organism
19
Homo sapiens
Biosample type
11
in vitro differentiated cells
8
cell line
Organ
650
pancreas
618
liver
586
connective tissue
425
adipose tissue
284
epithelium
180
heart
128
vasculature
122
blood vessel
107
kidney
86
brain
73
musculature of body
72
artery
70
bone element
55
blood
55
bodily fluid
44
limb
34
eye
19
embryo
18
ureter
14
spleen
12
skeleton
2
pericardium
vein
Project
19
AMP
Genome assembly (visualization)
19
GRCh38
19
hg19
1
hg18
Lab
19
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
3
inconsistent control read length
month_released!
February, 2018
October, 2019
organ_slims!
vein
BIOSAMPLE
ASSAY
19 results
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total RNA-seq
ChIP-seq
in vitro differentiated cells
pancreatic endoderm
7
Hepatic endoderm
2
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
cell line
H1-hESC
8
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