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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
211
accessible chromatin
174
candidate regulatory elements
164
target gene predictions
91
chromatin state
52
binding sites
38
variant allelic effects
37
histone modifications
3
eQTL
1
caQTL
1
gene expression
Date released
265
September, 2022
162
February, 2021
129
November, 2021
61
February, 2024
32
June, 2020
21
May, 2021
20
January, 2021
15
November, 2022
14
January, 2020
12
May, 2020
11
August, 2021
February, 2023
9
October, 2022
7
April, 2020
5
October, 2019
3
August, 2017
2
March, 2020
2
May, 2022
1
February, 2020
1
November, 2019
Available data
680
bed bed3+
162
bigWig
88
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
772
Homo sapiens
Biosample type
548
primary cell
148
tissue
50
cell line
26
in vitro differentiated cells
Organ
590
epithelium
423
brain
387
connective tissue
387
kidney
367
musculature of body
309
lung
283
intestine
237
limb
228
heart
217
bodily fluid
206
blood
205
embryo
203
vasculature
199
skin of body
186
pancreas
170
large intestine
158
blood vessel
145
extraembryonic component
124
liver
116
stomach
87
mammary gland
85
bone element
83
eye
83
small intestine
80
uterus
76
prostate gland
72
placenta
71
adrenal gland
69
adipose tissue
64
penis
64
ureter
62
lymph node
59
artery
49
thymus
45
gonad
41
spinal cord
40
esophagus
32
spleen
23
lymphoid tissue
23
testis
22
nerve
21
ovary
21
thyroid gland
21
vein
18
skeleton
17
mouth
16
bronchus
16
lymphatic vessel
13
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
616
AMP
129
ENCODE
20
T1D
7
LungMap
Genome assembly (visualization)
772
hg19
274
GRCh38
month_released!
February, 2023
BIOSAMPLE
TYPE
772 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
gene expression
primary cell
endothelial cell
15
7
2
2
1
1
1
1
hepatocyte
8
1
3
1
1
2
4
endothelial cell of umbilical vein
2
6
4
5
2
foreskin keratinocyte
11
4
4
trophoblast cell
1
7
5
4
1
+ See 103 more…
tissue
placenta
1
26
15
14
1
2
chorionic villus
8
4
4
breast epithelium
1
5
3
2
esophagus squamous epithelium
1
6
2
2
chorion membrane
1
3
3
3
+ See 20 more…
cell line
EndoC_BH1
8
1
1
EH
2
1
1
EL
2
1
1
ELR
2
1
1
keratinocyte
3
1
+ See 11 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
trophoblast cell
2
2
1
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
foreskin melanocyte
1
1
1
+ See 2 more…
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