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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
total RNA-seq
34
ChIP-seq
11
ATAC-seq
4
DNase-seq
Assay category
54
Transcription
34
DNA binding
15
DNA accessibility
Target of assay
26
histone
26
histone modification
18
broad histone mark
8
narrow histone mark
8
transcription factor
1
RNA binding protein
Date released
64
February, 2021
21
October, 2019
6
January, 2019
November, 2018
3
December, 2018
3
July, 2019
3
May, 2019
2
June, 2019
1
October, 2017
Available data
103
bam
95
bigWig
54
tsv
49
bed narrowPeak
34
bigBed narrowPeak
10
fastq
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
4
tagAlign
Organism
103
Homo sapiens
Biosample type
64
cell line
37
tissue
2
primary cell
Organ
655
pancreas
588
connective tissue
576
liver
425
adipose tissue
311
epithelium
188
heart
165
vasculature
162
brain
159
blood vessel
129
kidney
96
limb
93
artery
73
musculature of body
70
bone element
43
blood
43
bodily fluid
34
eye
31
nerve
29
embryo
ureter
17
vein
12
skeleton
10
spleen
2
pericardium
1
pituitary gland
Project
103
AMP
Genome assembly (visualization)
138
GRCh38
103
hg19
Lab
103
AMP-T2D consortium
month_released!
November, 2018
organ_slims!
ureter
BIOSAMPLE
ASSAY
103 results
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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
DNase-seq
cell line
smooth muscle cell of the coronary artery
52
4
8
tissue
tibial artery
18
1
2
spleen
9
1
coronary artery
3
1
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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