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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
216
ChIP-seq
49
single cell RNA-seq
Assay category
216
DNA binding
49
Transcription
Target of assay
238
transcription factor
recombinant protein
34
RNA binding protein
24
histone
24
histone modification
16
control
15
chromatin remodeller
14
narrow histone mark
10
broad histone mark
2
other context
2
other post-translational modification
Date released
574
February, 2021
316
May, 2021
276
August, 2017
260
May, 2020
216
November, 2017
210
October, 2019
187
June, 2019
164
July, 2018
97
May, 2019
91
July, 2019
77
December, 2017
72
September, 2018
65
April, 2019
60
August, 2021
59
November, 2019
58
November, 2018
49
April, 2018
47
October, 2018
45
February, 2023
39
May, 2022
32
March, 2020
31
February, 2018
30
December, 2018
26
January, 2019
13
October, 2017
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
1
May, 2023
Available data
265
bigWig
264
bam
254
fastq
194
bed narrowPeak
193
bigBed narrowPeak
70
bed broadPeak
64
bigBed broadPeak
49
tsv
18
tagAlign
3
tar
Organism
265
Homo sapiens
Biosample type
201
cell line
52
primary cell
12
tissue
Organ
201
liver
39
epithelium
39
pancreas
15
brain
6
vasculature
3
blood vessel
2
connective tissue
Project
265
AMP
Genome assembly (visualization)
265
hg19
263
GRCh38
Lab
265
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
20
inconsistent control read length
4
inconsistent control run_type
target.investigated_as!
recombinant protein
BIOSAMPLE
ASSAY
265 results
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Clear Filters
ChIP-seq
single cell RNA-seq
cell line
HepG2
201
primary cell
pancreatic delta cell
7
pancreatic acinar cell
6
pancreatic ductal cell
6
pancreatic polypeptide-secreting cell
6
mesenchymal cell
5
+ See 8 more…
tissue
islet of Langerhans
6
cingulate gyrus
2
middle frontal area 46
2
caudate nucleus
1
substantia nigra
1
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