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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
ChIP-seq
9
DNase-seq
3
single cell RNA-seq
1
FAIRE-seq
Assay category
58
DNA binding
10
DNA accessibility
3
Transcription
Target of assay
61
transcription factor
21
RNA binding protein
13
recombinant protein
7
chromatin remodeller
other context
3
other post-translational modification
Date released
574
February, 2021
316
May, 2021
279
November, 2017
276
August, 2017
May, 2020
217
October, 2019
187
June, 2019
164
July, 2018
97
May, 2019
91
July, 2019
77
December, 2017
72
September, 2018
68
November, 2018
65
April, 2019
60
August, 2021
59
November, 2019
49
April, 2018
47
October, 2018
45
February, 2023
39
May, 2022
32
March, 2020
31
February, 2018
30
December, 2018
26
January, 2019
13
October, 2017
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
1
May, 2023
Available data
71
bam
71
bigWig
71
fastq
68
bed narrowPeak
68
bigBed narrowPeak
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
3
tsv
Organism
71
Homo sapiens
Biosample type
54
cell line
14
tissue
3
primary cell
Organ
49
liver
12
blood
12
bodily fluid
6
pancreas
3
epithelium
2
brain
1
adipose tissue
1
connective tissue
1
spleen
Project
71
AMP
Genome assembly (visualization)
79
GRCh38
71
hg19
Lab
71
AMP-T2D consortium
Audit category:
2
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
month_released!
May, 2020
target.investigated_as!
other context
BIOSAMPLE
ASSAY
71 results
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Clear Filters
ChIP-seq
DNase-seq
single cell RNA-seq
FAIRE-seq
cell line
HepG2
42
GM12878
12
tissue
liver
4
2
body of pancreas
2
brain
2
omental fat pad
1
pancreas
1
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primary cell
pancreatic alpha cell
2
pancreatic acinar cell
1
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