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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
77
ChIP-seq
38
ATAC-seq
1
snATAC-seq
Assay category
77
DNA binding
39
DNA accessibility
Target of assay
42
transcription factor
30
histone
30
histone modification
15
broad histone mark
15
narrow histone mark
5
control
4
RNA binding protein
3
chromatin remodeller
Date released
574
February, 2021
316
May, 2021
281
November, 2017
276
August, 2017
260
May, 2020
217
October, 2019
187
June, 2019
164
July, 2018
97
May, 2019
91
July, 2019
77
December, 2017
72
September, 2018
71
November, 2018
65
April, 2019
60
August, 2021
59
November, 2019
49
April, 2018
47
October, 2018
45
February, 2023
39
May, 2022
32
March, 2020
31
February, 2018
30
December, 2018
26
January, 2019
13
October, 2017
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
1
May, 2023
Available data
110
bed narrowPeak
95
bam
95
fastq
92
bigWig
50
bigBed narrowPeak
16
bed bed3+
1
txt
Organism
116
Homo sapiens
Biosample type
75
tissue
38
in vitro differentiated cells
3
stem cell
Organ
70
liver
18
pancreas
16
epithelium
9
embryo
1
musculature of body
Project
116
AMP
Genome assembly (visualization)
116
hg19
77
GRCh38
Lab
78
AMP-T2D consortium
20
Karen Mohlke, UNC
18
Kyle Gaulton, UCSD
Audit category:
27
inconsistent control
2
inconsistent ontology term
1
audit script error
Audit category:
11
inconsistent control read length
month_released!
January, 2018
BIOSAMPLE
ASSAY
116 results
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Clear Filters
ChIP-seq
ATAC-seq
snATAC-seq
tissue
liver
29
20
islet of Langerhans
18
right lobe of liver
7
skeletal muscle tissue
1
in vitro differentiated cells
hepatocyte
14
pancreatic endoderm
7
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
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stem cell
hESC
3
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