Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
348
ChIP-seq
9
DNase-seq
1
FAIRE-seq
Assay category
348
DNA binding
10
DNA accessibility
Target of assay
327
transcription factor
78
recombinant protein
57
RNA binding protein
chromatin remodeller
24
histone
24
histone modification
16
control
14
narrow histone mark
10
broad histone mark
5
other context
5
other post-translational modification
Date released
574
February, 2021
316
May, 2021
273
August, 2017
266
November, 2017
260
May, 2020
217
October, 2019
187
June, 2019
164
July, 2018
97
May, 2019
91
July, 2019
74
December, 2017
72
September, 2018
65
April, 2019
64
November, 2018
60
August, 2021
59
November, 2019
49
April, 2018
47
October, 2018
45
February, 2023
39
May, 2022
32
March, 2020
31
February, 2018
28
December, 2018
20
January, 2019
13
October, 2017
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
1
May, 2023
Available data
358
bigWig
357
bam
352
fastq
336
bed narrowPeak
335
bigBed narrowPeak
75
bed broadPeak
69
bigBed broadPeak
18
tagAlign
9
bed bed3+
3
tar
Organism
358
Homo sapiens
Biosample type
323
cell line
26
tissue
9
primary cell
Organ
295
liver
35
blood
35
bodily fluid
17
brain
7
spleen
6
epithelium
6
vasculature
3
blood vessel
3
pancreas
1
adipose tissue
1
connective tissue
Project
358
AMP
Genome assembly (visualization)
367
GRCh38
358
hg19
Lab
358
AMP-T2D consortium
Audit category:
6
missing controlled_by
Audit category:
15
inconsistent control read length
target.investigated_as!
chromatin remodeller
BIOSAMPLE
ASSAY
358 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
FAIRE-seq
cell line
HepG2
288
GM12878
35
tissue
spleen
6
1
liver
4
2
body of pancreas
2
brain
2
cingulate gyrus
2
+ See 6 more…
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
See all biosamples
Download