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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
330
total RNA-seq
59
ATAC-seq
59
ChIP-seq
48
single cell RNA-seq
Assay category
378
Transcription
59
DNA accessibility
59
DNA binding
Target of assay
59
histone
59
histone modification
42
narrow histone mark
17
broad histone mark
Date released
574
February, 2021
316
May, 2021
281
November, 2017
276
August, 2017
260
May, 2020
217
October, 2019
187
June, 2019
164
July, 2018
97
May, 2019
91
July, 2019
December, 2017
72
September, 2018
71
November, 2018
65
April, 2019
60
August, 2021
59
November, 2019
49
April, 2018
47
October, 2018
45
February, 2023
39
May, 2022
32
March, 2020
31
February, 2018
30
December, 2018
26
January, 2019
13
October, 2017
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
1
May, 2023
Available data
496
bam
496
bigWig
378
tsv
122
fastq
73
bed narrowPeak
27
tagAlign
14
bigBed narrowPeak
Organism
496
Homo sapiens
Biosample type
286
tissue
210
primary cell
Organ
225
pancreas
170
liver
94
epithelium
2
connective tissue
Project
451
AMP
45
T1D
Genome assembly (visualization)
496
hg19
443
GRCh38
Lab
451
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
14
inconsistent ontology term
Audit category:
32
missing controlled_by
month_released!
December, 2017
BIOSAMPLE
ASSAY
496 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
single cell RNA-seq
tissue
liver
143
27
islet of Langerhans
116
primary cell
pancreatic ductal cell
4
4
13
3
pancreatic beta cell
10
4
9
pancreatic alpha cell
10
3
7
pancreatic acinar cell
2
3
8
5
pancreatic endocrine cell
11
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