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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
31
total RNA-seq
17
small RNA-seq
13
RRBS
3
single cell RNA-seq
2
FAIRE-seq
2
Hi-C
Assay category
51
Transcription
13
DNA methylation
2
3D chromatin structure
2
DNA accessibility
Target of assay
3
control
Date released
510
February, 2021
313
May, 2021
278
November, 2017
276
August, 2017
260
May, 2020
172
October, 2019
164
July, 2018
155
June, 2019
77
December, 2017
72
September, 2018
71
November, 2018
68
July, 2019
60
August, 2021
59
November, 2019
49
April, 2018
47
October, 2018
46
May, 2019
45
February, 2023
39
May, 2022
February, 2018
30
December, 2018
26
January, 2019
25
March, 2020
18
April, 2019
13
October, 2017
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
1
May, 2023
Available data
55
bigWig
53
bam
51
tsv
13
bed bedMethyl
13
bigBed bedMethyl
2
bed bed3+
2
bed narrowPeak
2
bigBed narrowPeak
2
hdf5
Organism
68
Homo sapiens
Biosample type
44
tissue
24
primary cell
Organ
18
connective tissue
17
brain
heart
13
epithelium
12
adipose tissue
11
kidney
10
vasculature
blood vessel
9
liver
6
pancreas
5
musculature of body
3
artery
2
pericardium
1
eye
Project
68
AMP
Genome assembly (visualization)
68
hg19
53
GRCh38
Lab
68
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
February, 2018
organ_slims!
blood vessel
heart
BIOSAMPLE
ASSAY
68 results
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total RNA-seq
small RNA-seq
RRBS
single cell RNA-seq
FAIRE-seq
Hi-C
tissue
omental fat pad
4
1
subcutaneous adipose tissue
4
1
body of pancreas
2
2
right lobe of liver
2
2
frontal cortex
1
1
1
+ See 14 more…
primary cell
cerebellar granule cell
2
epithelial cell of proximal tubule
1
1
kidney epithelial cell
1
1
mesenchymal stem cell of adipose
1
1
renal cortical epithelial cell
1
1
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