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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
165
DNase-seq
23
ChIP-seq
5
total RNA-seq
1
ATAC-seq
Assay category
166
DNA accessibility
23
DNA binding
5
Transcription
Target of assay
19
histone
19
histone modification
11
narrow histone mark
8
broad histone mark
4
RNA binding protein
4
transcription factor
Date released
574
February, 2021
316
May, 2021
November, 2017
276
August, 2017
260
May, 2020
217
October, 2019
187
June, 2019
164
July, 2018
97
May, 2019
91
July, 2019
77
December, 2017
72
September, 2018
71
November, 2018
65
April, 2019
60
August, 2021
59
November, 2019
49
April, 2018
47
October, 2018
45
February, 2023
39
May, 2022
32
March, 2020
31
February, 2018
30
December, 2018
26
January, 2019
13
October, 2017
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
1
May, 2023
Available data
193
bam
192
bigWig
189
bed narrowPeak
188
bigBed narrowPeak
165
bed bed3+
165
bed broadPeak
165
bigBed broadPeak
4
tsv
Organism
194
Homo sapiens
Biosample type
148
tissue
46
primary cell
Organ
73
kidney
41
musculature of body
32
limb
30
heart
21
connective tissue
20
brain
18
ureter
12
epithelium
6
eye
6
vasculature
4
blood vessel
2
adipose tissue
2
artery
2
liver
2
pancreas
Project
194
AMP
Genome assembly (visualization)
228
GRCh38
194
hg19
Lab
194
AMP-T2D consortium
Audit category:
22
inconsistent ontology term
month_released!
November, 2017
BIOSAMPLE
ASSAY
194 results
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Clear Filters
DNase-seq
ChIP-seq
total RNA-seq
ATAC-seq
tissue
muscle of arm
17
heart
16
kidney
13
muscle of leg
13
brain
12
+ See 23 more…
primary cell
skeletal muscle satellite cell
7
mesenchymal stem cell
6
osteoblast
1
4
1
cardiac fibroblast
2
3
cardiac muscle cell
1
2
+ See 14 more…
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