Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 175total RNA-seq
  • 123ChIP-seq
  • 18ATAC-seq
Assay category
  • 175Transcription
  • 123DNA binding
  • 18DNA accessibility
Target of assay
  • 116histone
  • 116histone modification
  • 64broad histone mark
  • 52narrow histone mark
  • 4transcription factor
  • 3control
Date released
  • 574February, 2021
  • 316May, 2021
  • 281November, 2017
  • 276August, 2017
  • 260May, 2020
  • 217October, 2019
  • 187June, 2019
  • 164July, 2018
  • 97May, 2019
  • 91July, 2019
  • 77December, 2017
  • 72September, 2018
  • 71November, 2018
  • 65April, 2019
  • 60August, 2021
  • 59November, 2019
  • 49April, 2018
  • 47October, 2018
  • 45February, 2023
  • 39May, 2022
  • 32March, 2020
  • 31February, 2018
  • 30December, 2018
  • 26January, 2019
  • 13October, 2017
  • 7September, 2017
  • 6November, 2020
  • 5December, 2019
  • 3August, 2018
  • 3January, 2018
  • 3June, 2018
  • 3March, 2019
  • 3October, 2022
  • 1May, 2023
Available data
  • 303bigWig
  • 276bam
  • 173tsv
  • 133bed narrowPeak
  • 89tagAlign
  • 2bed bed3+
Organism
  • 316Homo sapiens
Biosample type
  • 184primary cell
  • 89in vitro differentiated cells
  • 38tissue
  • 5cell line
Organ
  • 43pancreas
  • 9epithelium
  • 3heart
  • 2embryo
  • 1connective tissue
Project
  • 180AMP
  • 136T1D
Genome assembly (visualization)
  • 316hg19
  • 276GRCh38
Lab
  • 175Kyle Gaulton, UCSD
  • 141AMP-T2D consortium
Audit category:
  • 73inconsistent ontology term
BIOSAMPLE
ASSAY

316 results

search-icontable-tab-icon
Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
primary cell
monocyte518413
CD8-positive, alpha-beta T cell233
embryonic stem cell1
in vitro differentiated cells
cardiomyocytes593
induced pluripotent stem cell9
embryonic stem cell5
pancreatic PP cell2
cardiac fibroblast1
tissue
islet of Langerhans36
cardiac atrium1
cardiac ventricle1
cell line
EndoC_BH141
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego