Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
110
target gene predictions
94
candidate regulatory elements
47
chromatin state
28
binding sites
27
accessible chromatin
20
histone modifications
6
Fine-mapped variants
5
variant allelic effects
2
eQTL
Date released
135
September, 2022
92
February, 2021
52
February, 2024
13
June, 2020
12
November, 2021
9
May, 2021
6
March, 2020
6
October, 2022
5
May, 2020
2
February, 2020
2
January, 2020
2
November, 2019
1
August, 2017
1
February, 2023
1
May, 2019
Available data
285
bed bed3+
46
bed bed9
15
bigWig
8
tsv
2
bigBed bed9
Organism
339
Homo sapiens
Biosample type
138
cell line
126
primary cell
66
tissue
9
in vitro differentiated cells
Organ
610
epithelium
423
brain
395
connective tissue
387
kidney
367
musculature of body
309
lung
283
intestine
237
limb
231
heart
217
bodily fluid
207
vasculature
206
blood
205
embryo
199
skin of body
186
pancreas
170
large intestine
159
blood vessel
145
extraembryonic component
126
liver
116
stomach
107
eye
87
mammary gland
85
bone element
83
small intestine
80
uterus
76
prostate gland
72
placenta
71
adrenal gland
69
adipose tissue
64
penis
64
ureter
62
lymph node
60
artery
49
thymus
45
gonad
41
spinal cord
40
esophagus
32
spleen
23
lymphoid tissue
23
testis
22
nerve
21
ovary
21
thyroid gland
21
vein
19
lymphatic vessel
18
skeleton
17
mouth
16
bronchus
13
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
327
AMP
12
ENCODE
Genome assembly (visualization)
339
hg19
133
GRCh38
BIOSAMPLE
TYPE
339 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
binding sites
accessible chromatin
histone modifications
Fine-mapped variants
variant allelic effects
eQTL
cell line
HeLa-S3
55
5
3
1
GM23248
1
2
1
1
1
1
RPMI7951
1
2
1
1
SK-MEL-5
1
2
1
1
iPS DF 19.11
2
2
1
+ See 18 more…
primary cell
foreskin keratinocyte
4
11
4
keratinocyte
5
3
3
1
2
2
1
foreskin fibroblast
2
6
1
4
1
2
fibroblast of dermis
4
4
3
1
dermis blood vessel endothelial cell
2
6
2
+ See 15 more…
tissue
coronary artery
3
3
3
3
3
2
1
tibial artery
2
3
3
3
3
2
1
lower leg skin
2
6
2
uterus
2
3
1
1
skin of body
1
1
1
+ See 6 more…
in vitro differentiated cells
foreskin keratinocyte
1
1
1
iPS DF 4.7 Cell Line
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
skin fibroblast
1
See all biosamples
Download