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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
102
ChIP-seq
36
DNase-seq
9
ATAC-seq
4
total RNA-seq
Assay category
102
DNA binding
45
DNA accessibility
4
Transcription
Target of assay
51
transcription factor
49
histone
49
histone modification
34
broad histone mark
15
narrow histone mark
10
RNA binding protein
10
chromatin remodeller
Date released
52
October, 2019
32
June, 2019
27
December, 2018
15
January, 2019
12
November, 2018
6
February, 2021
6
May, 2019
1
January, 2018
Available data
150
bam
146
bed narrowPeak
145
bigWig
138
bigBed narrowPeak
54
fastq
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
4
tsv
Organism
151
Homo sapiens
Biosample type
96
tissue
55
cell line
Organ
658
pancreas
625
liver
589
connective tissue
426
adipose tissue
311
epithelium
188
heart
165
vasculature
164
brain
159
blood vessel
129
kidney
96
limb
93
artery
73
musculature of body
70
bone element
55
blood
55
bodily fluid
34
eye
31
nerve
29
embryo
18
ureter
17
vein
14
spleen
12
skeleton
2
pericardium
1
pituitary gland
0
ovary
Project
151
AMP
Genome assembly (visualization)
151
hg19
150
GRCh38
Lab
151
AMP-T2D consortium
Audit category:
1
inconsistent control
1
inconsistent ontology term
BIOSAMPLE
ASSAY
151 results
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ChIP-seq
DNase-seq
ATAC-seq
total RNA-seq
tissue
tibial nerve
24
2
1
4
tibial artery
18
2
1
muscle of leg
6
13
muscle of arm
17
distal epiphysis of femur
1
+ See 7 more…
cell line
GM12878
54
1
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