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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 76ChIP-seq
  • 58total RNA-seq
  • 11ATAC-seq
  • 8DNase-seq
  • 5Hi-C
  • 1FAIRE-seq
Assay category
  • 76DNA binding
  • 58Transcription
  • 20DNA accessibility
  • 53D chromatin structure
Target of assay
  • 67histone
  • 67histone modification
  • 43broad histone mark
  • 24narrow histone mark
  • 8transcription factor
  • 4RNA binding protein
  • 1control
Date released
  • 64February, 2021
  • 39May, 2019
  • 37October, 2019
  • 9July, 2019
  • 4June, 2019
  • 3March, 2020
  • 3November, 2017
Available data
  • 154bam
  • 148bigWig
  • 93bed narrowPeak
  • 78bigBed narrowPeak
  • 58tsv
  • 12bed broadPeak
  • 12bigBed broadPeak
  • 10bed bed3+
  • 4tagAlign
  • 3fastq
  • 3hic
  • 2bedpe bed3+
  • 2hdf5
  • 1tar
Organism
  • 159Homo sapiens
Biosample type
  • 70tissue
  • 64cell line
  • 25primary cell
Organ
  • 658pancreas
  • 625liver
  • 589connective tissue
  • 426adipose tissue
  • 311epithelium
  • 188heart
  • 165vasculature
  • 164brain
  • 159blood vessel
  • 129kidney
  • 96limb
  • 93artery
  • 73musculature of body
  • 70bone element
  • 55blood
  • 55bodily fluid
  • 34eye
  • 31nerve
  • 29embryo
  • 18ureter
  • 17vein
  • 14spleen
  • 12skeleton
  • 2pericardium
  • 1pituitary gland
Project
  • 159AMP
Genome assembly (visualization)
  • 187GRCh38
  • 159hg19
Lab
  • 159AMP-T2D consortium
Audit category:
  • 1audit script error
BIOSAMPLE
ASSAY

159 results

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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
Hi-C
FAIRE-seq
tissue
tibial artery1812
ascending aorta1311
thoracic aorta1221
aorta1111
coronary artery312
cell line
smooth muscle cell of the coronary artery4528
primary cell
endothelial cell of umbilical vein12221
brain microvascular endothelial cell311
endothelial cell of coronary artery1
endothelial cell of hepatic sinusoid1
smooth muscle cell of the coronary artery1
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