Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 25candidate regulatory elements
  • 16target gene predictions
  • 15accessible chromatin
  • 15chromatin state
  • 8binding sites
  • 6histone modifications
Date released
  • 42September, 2022
  • 32February, 2021
  • 5June, 2020
  • 2January, 2021
  • 1May, 2020
  • 1May, 2022
  • 1November, 2021
  • 1October, 2022
Available data
  • 70bed bed3+
  • 14bed bed9
  • 10bigWig
  • 1bed bed9+
Organism
  • 85Homo sapiens
Collection Tags
  • 42EpiMap
  • 18ChIP-Atlas
  • 12ENCODE
  • 8DGA
  • 3T1D
  • 2BLUEPRINT
  • 1AMP
  • 1T2DKP
Biosample type
  • 53cell line
  • 18tissue
  • 14primary cell
Organ
  • 609epithelium
  • 423brain
  • 395connective tissue
  • 387kidney
  • 367musculature of body
  • 309lung
  • 283intestine
  • 237limb
  • 231heart
  • 217bodily fluid
  • 207vasculature
  • 206blood
  • 205embryo
  • 199skin of body
  • 186pancreas
  • 170large intestine
  • 159blood vessel
  • 145extraembryonic component
  • 126liver
  • 116stomach
  • 107eye
  • 87mammary gland
  • 85bone element
  • 83small intestine
  • 80uterus
  • 76prostate gland
  • 72placenta
  • 71adrenal gland
  • 69adipose tissue
  • 64penis
  • 64ureter
  • 62lymph node
  • 60artery
  • 49thymus
  • 45gonad
  • 41spinal cord
  • 40esophagus
  • 32spleen
  • 23lymphoid tissue
  • 23testis
  • 22nerve
  • 21ovary
  • 21thyroid gland
  • 21vein
  • 19lymphatic vessel
  • 18skeleton
  • 17mouth
  • 16bronchus
  • 13bone marrow
  • 11breast
  • 11pituitary gland
  • 9tongue
  • 9urinary bladder
  • 8vagina
  • 5trachea
  • 4nose
Project
  • 82AMP
  • 2T1D
  • 1ENCODE
Genome assembly (visualization)
  • 85hg19
  • 23GRCh38
BIOSAMPLE
TYPE

85 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
binding sites
histone modifications
cell line
MG63211111
OCI-LY121111
SJSA121111
L1-S82111
OCI-LY32111
HS-27A211
HS-5211
KMS-11211
L1-S8R1111
NCI-H929211
U2OS121
tissue
femur211
arm bone111
leg bone111
distal epiphysis1
distal epiphysis of femur1
distal epiphysis of humerus1
distal epiphysis of tibia1
proximal epiphysis1
proximal epiphysis of femur1
proximal epiphysis of humerus1
proximal epiphysis of tibia1
primary cell
megakaryocyte22
stromal cell of bone marrow211
mononuclear cell of bone marrow21
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell1
bone cell1
bone marrow cell1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego