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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
92
candidate regulatory elements
91
accessible chromatin
81
target gene predictions
50
chromatin state
33
binding sites
26
histone modifications
16
variant allelic effects
11
eQTL
6
Fine-mapped variants
2
gene expression
2
pQTL
1
caQTL
Date released
126
September, 2022
92
February, 2021
52
November, 2021
21
June, 2020
17
February, 2024
13
May, 2021
12
October, 2022
9
January, 2020
9
March, 2020
9
May, 2020
8
August, 2021
8
May, 2024
7
August, 2017
7
November, 2022
4
April, 2020
3
May, 2022
2
February, 2020
2
January, 2021
2
November, 2020
2
October, 2019
2
September, 2018
2
September, 2023
1
June, 2021
Available data
351
bed bed3+
57
bigWig
43
bed bed9
8
tsv
2
bigBed bed9
1
bigBed narrowPeak
Organism
411
Homo sapiens
Biosample type
259
primary cell
72
tissue
48
in vitro differentiated cells
31
cell line
1
stem cell
Organ
610
epithelium
423
brain
395
connective tissue
387
kidney
367
musculature of body
309
lung
283
intestine
237
limb
231
heart
217
bodily fluid
207
vasculature
206
blood
205
embryo
199
skin of body
186
pancreas
170
large intestine
159
blood vessel
145
extraembryonic component
126
liver
116
stomach
107
eye
87
mammary gland
85
bone element
83
small intestine
80
uterus
76
prostate gland
72
placenta
71
adrenal gland
69
adipose tissue
64
penis
64
ureter
62
lymph node
60
artery
49
thymus
45
gonad
41
spinal cord
40
esophagus
32
spleen
23
lymphoid tissue
23
testis
22
nerve
21
ovary
21
thyroid gland
21
vein
19
lymphatic vessel
18
skeleton
17
mouth
16
bronchus
13
bone marrow
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
349
AMP
52
ENCODE
4
ITG
4
LungMap
2
T1D
Genome assembly (visualization)
411
hg19
134
GRCh38
2
hg18
organ_slims!
breast
BIOSAMPLE
TYPE
411 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
binding sites
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
gene expression
pQTL
caQTL
primary cell
fibroblast
3
16
4
1
6
pericyte cell
3
10
10
1
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
1
2
1
4
2
osteoblast
2
5
2
1
3
2
+ See 35 more…
tissue
adipose tissue
7
2
8
6
1
1
3
omental fat pad
5
2
2
2
1
3
subcutaneous adipose tissue
2
2
1
1
4
3
subcutaneous abdominal adipose tissue
5
1
cartilage tissue
1
2
2
+ See 4 more…
in vitro differentiated cells
adipocyte
4
4
6
6
1
1
mesenchymal stem cell
3
1
3
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 7 more…
cell line
GM23248
2
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
foreskin fibroblast
1
1
1
adipose tissue derived mesenchymal stem cell
1
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
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