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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
302
accessible chromatin
204
candidate regulatory elements
203
target gene predictions
105
chromatin state
74
binding sites
55
variant allelic effects
53
histone modifications
15
eQTL
9
Fine-mapped variants
3
gene expression
2
caQTL
2
pQTL
Date released
280
September, 2022
201
February, 2021
177
November, 2021
77
February, 2024
45
June, 2020
30
May, 2021
24
January, 2020
24
May, 2020
22
January, 2021
22
November, 2022
19
August, 2021
18
May, 2024
18
October, 2022
14
March, 2020
10
April, 2020
10
August, 2017
10
February, 2023
7
October, 2019
5
May, 2022
4
February, 2020
2
November, 2019
2
November, 2020
2
September, 2018
2
September, 2023
1
June, 2021
Available data
907
bed bed3+
224
bigWig
95
bed bed9
15
bigBed narrowPeak
12
tsv
5
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1027
Homo sapiens
Biosample type
744
primary cell
153
tissue
66
in vitro differentiated cells
63
cell line
1
stem cell
Organ
610
epithelium
423
brain
395
connective tissue
387
kidney
367
musculature of body
309
lung
283
intestine
237
limb
231
heart
217
bodily fluid
207
vasculature
206
blood
205
embryo
199
skin of body
186
pancreas
170
large intestine
159
blood vessel
145
extraembryonic component
126
liver
116
stomach
107
eye
87
mammary gland
85
bone element
83
small intestine
80
uterus
76
prostate gland
72
placenta
71
adrenal gland
69
adipose tissue
64
penis
64
ureter
62
lymph node
60
artery
49
thymus
45
gonad
41
spinal cord
40
esophagus
32
spleen
23
lymphoid tissue
23
testis
22
nerve
21
ovary
21
thyroid gland
21
vein
19
lymphatic vessel
18
skeleton
17
mouth
16
bronchus
13
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
814
AMP
177
ENCODE
22
T1D
10
LungMap
4
ITG
Genome assembly (visualization)
1027
hg19
385
GRCh38
2
hg18
BIOSAMPLE
TYPE
1027 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
gene expression
caQTL
pQTL
primary cell
endothelial cell
15
3
7
2
2
1
1
1
1
fibroblast
16
3
4
1
6
pericyte cell
10
3
10
1
hepatocyte
8
2
3
1
1
2
4
endothelial cell of umbilical vein
2
6
4
5
2
+ See 131 more…
tissue
adipose tissue
2
7
8
6
1
1
3
tibial nerve
3
6
3
4
2
1
3
pigmented layer of retina
20
omental fat pad
2
5
2
2
1
3
subcutaneous adipose tissue
2
2
1
1
4
3
+ See 23 more…
in vitro differentiated cells
adipocyte
4
4
6
6
1
1
mesenchymal stem cell
1
3
3
2
1
1
retinal pigment epithelial cell
6
chondrocyte
5
hepatocyte
2
1
1
+ See 12 more…
cell line
EndoC_BH1
8
1
1
GM23248
1
2
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
keratinocyte
3
1
+ See 18 more…
stem cell
mesenchymal stem cell
1
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