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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
94
candidate regulatory elements
91
accessible chromatin
81
target gene predictions
52
chromatin state
31
binding sites
25
histone modifications
17
variant allelic effects
12
eQTL
9
Fine-mapped variants
2
gene expression
2
pQTL
1
caQTL
Date released
129
September, 2022
90
February, 2021
50
November, 2021
21
June, 2020
16
February, 2024
13
May, 2021
12
March, 2020
12
May, 2020
12
October, 2022
10
January, 2020
8
August, 2021
8
May, 2024
7
August, 2017
7
November, 2022
3
April, 2020
3
February, 2020
3
May, 2022
2
January, 2021
2
November, 2020
2
October, 2019
2
September, 2018
2
September, 2023
1
June, 2021
1
November, 2019
Available data
351
bed bed3+
57
bigWig
45
bed bed9
12
tsv
3
bigBed bed9
1
bigBed narrowPeak
Organism
417
Homo sapiens
Biosample type
243
primary cell
94
tissue
48
in vitro differentiated cells
31
cell line
1
stem cell
Organ
610
epithelium
423
brain
395
connective tissue
387
kidney
367
musculature of body
309
lung
283
intestine
237
limb
231
heart
217
bodily fluid
207
vasculature
206
blood
205
embryo
199
skin of body
186
pancreas
large intestine
159
blood vessel
145
extraembryonic component
126
liver
116
stomach
107
eye
87
mammary gland
85
bone element
83
small intestine
80
uterus
76
prostate gland
72
placenta
71
adrenal gland
69
adipose tissue
64
penis
64
ureter
62
lymph node
60
artery
49
thymus
45
gonad
41
spinal cord
40
esophagus
32
spleen
23
lymphoid tissue
23
testis
22
nerve
21
ovary
21
thyroid gland
21
vein
19
lymphatic vessel
18
skeleton
17
mouth
16
bronchus
13
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
358
AMP
50
ENCODE
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
417
hg19
141
GRCh38
2
hg18
organ_slims!
large intestine
BIOSAMPLE
TYPE
417 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
binding sites
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
gene expression
pQTL
caQTL
primary cell
fibroblast
3
16
4
1
6
pericyte cell
3
10
10
1
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
1
2
1
4
2
osteoblast
2
5
2
1
3
2
+ See 32 more…
tissue
adipose tissue
7
2
8
6
1
1
3
tibial nerve
6
3
3
4
2
1
3
omental fat pad
5
2
2
2
1
3
subcutaneous adipose tissue
2
2
1
1
4
3
subcutaneous abdominal adipose tissue
5
1
+ See 5 more…
in vitro differentiated cells
adipocyte
4
4
6
6
1
1
mesenchymal stem cell
3
1
3
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 7 more…
cell line
GM23248
2
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
foreskin fibroblast
1
1
1
adipose tissue derived mesenchymal stem cell
1
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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