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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
241
candidate regulatory elements
234
accessible chromatin
200
target gene predictions
126
chromatin state
44
binding sites
44
variant allelic effects
31
histone modifications
9
eQTL
6
Fine-mapped variants
6
gene expression
3
caQTL
Date released
355
September, 2022
188
February, 2021
131
November, 2021
74
February, 2024
29
June, 2020
23
May, 2021
20
January, 2021
19
January, 2020
18
May, 2020
15
November, 2022
12
August, 2021
12
March, 2020
10
February, 2023
9
October, 2022
7
April, 2020
6
October, 2019
5
August, 2017
5
May, 2022
3
February, 2020
2
May, 2019
1
November, 2019
Available data
804
bed bed3+
180
bigWig
121
bed bed9
14
bigBed narrowPeak
8
tsv
5
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
944
Homo sapiens
Biosample type
480
primary cell
406
tissue
43
cell line
15
in vitro differentiated cells
Organ
600
epithelium
423
brain
387
connective tissue
387
kidney
367
musculature of body
309
lung
283
intestine
237
limb
229
heart
217
bodily fluid
206
blood
205
embryo
204
vasculature
skin of body
186
pancreas
170
large intestine
159
blood vessel
145
extraembryonic component
124
liver
116
stomach
107
eye
87
mammary gland
85
bone element
83
small intestine
80
uterus
76
prostate gland
72
placenta
71
adrenal gland
69
adipose tissue
64
penis
64
ureter
62
lymph node
60
artery
49
thymus
45
gonad
41
spinal cord
40
esophagus
32
spleen
23
lymphoid tissue
23
testis
22
nerve
21
ovary
21
thyroid gland
21
vein
18
skeleton
17
mouth
16
bronchus
16
lymphatic vessel
13
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
786
AMP
131
ENCODE
20
T1D
7
LungMap
Genome assembly (visualization)
944
hg19
323
GRCh38
organ_slims!
skin of body
BIOSAMPLE
TYPE
944 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
gene expression
caQTL
primary cell
endothelial cell
15
7
2
2
1
1
1
1
hepatocyte
1
8
3
1
1
2
4
endothelial cell of umbilical vein
6
2
4
5
2
mammary gland epithelial cell
3
1
4
3
1
1
pancreatic ductal cell
6
3
1
1
2
+ See 96 more…
tissue
muscle of arm
33
1
16
16
1
muscle of leg
27
2
14
15
muscle of back
28
13
13
thymus
20
1
14
11
1
1
pigmented layer of retina
20
+ See 35 more…
cell line
EndoC_BH1
8
1
1
LHCN-M2
2
1
1
1
1
1
A673
2
2
1
SJCRH30
2
1
1
1
choroid plexus epithelial cell
1
1
1
+ See 7 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
mammary gland epithelial cell
1
1
1
myotube
1
1
See all biosamples
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