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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
226
accessible chromatin
148
candidate regulatory elements
146
target gene predictions
75
chromatin state
47
binding sites
42
variant allelic effects
31
histone modifications
13
eQTL
3
Fine-mapped variants
1
caQTL
1
gene expression
1
sQTL
Date released
206
September, 2022
138
February, 2021
122
November, 2021
65
February, 2024
28
June, 2020
22
January, 2021
22
May, 2021
19
August, 2021
17
January, 2020
17
May, 2020
15
November, 2022
10
February, 2023
10
May, 2024
9
March, 2020
7
April, 2020
6
August, 2017
6
October, 2019
6
October, 2022
3
November, 2019
2
February, 2020
2
May, 2022
1
April, 2019
1
June, 2021
Available data
650
bed bed3+
177
bigWig
68
bed bed9
15
bigBed narrowPeak
4
bigBed bed9
4
tsv
3
bam
3
bed gappedPeak
3
xls
Organism
734
Homo sapiens
Biosample type
501
primary cell
175
tissue
40
cell line
18
in vitro differentiated cells
Organ
610
epithelium
423
brain
395
connective tissue
387
kidney
367
musculature of body
309
lung
283
intestine
237
limb
231
heart
217
bodily fluid
207
vasculature
206
blood
205
embryo
199
skin of body
186
pancreas
large intestine
159
blood vessel
145
extraembryonic component
126
liver
116
stomach
107
eye
87
mammary gland
85
bone element
83
small intestine
80
uterus
76
prostate gland
72
placenta
71
adrenal gland
69
adipose tissue
64
penis
64
ureter
62
lymph node
60
artery
49
thymus
45
gonad
41
spinal cord
40
esophagus
32
spleen
23
lymphoid tissue
23
testis
22
nerve
21
ovary
21
thyroid gland
21
vein
19
lymphatic vessel
18
skeleton
17
mouth
16
bronchus
13
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
583
AMP
122
ENCODE
22
T1D
7
LungMap
Genome assembly (visualization)
734
hg19
276
GRCh38
organ_slims!
large intestine
BIOSAMPLE
TYPE
734 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
gene expression
sQTL
primary cell
endothelial cell
15
3
7
2
2
1
1
1
1
hepatocyte
8
2
3
1
1
2
4
endothelial cell of umbilical vein
2
6
4
5
2
foreskin keratinocyte
11
4
4
keratinocyte
2
3
5
3
1
1
2
+ See 96 more…
tissue
spleen
2
15
8
6
1
islet of Langerhans
6
1
3
2
1
1
9
1
body of pancreas
8
5
4
1
1
3
pancreas
5
5
5
3
1
1
1
pigmented layer of retina
20
+ See 19 more…
cell line
EndoC_BH1
8
1
1
Panc1
2
2
1
keratinocyte
3
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 8 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
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