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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
297
candidate regulatory elements
164
target gene predictions
147
chromatin state
76
accessible chromatin
17
variant allelic effects
14
histone modifications
13
binding sites
3
eQTL
Date released
422
September, 2022
180
February, 2021
28
November, 2021
27
June, 2020
16
August, 2021
14
January, 2020
14
May, 2020
10
February, 2024
7
May, 2021
4
August, 2017
3
March, 2020
3
October, 2022
1
April, 2019
1
February, 2020
1
May, 2019
Available data
587
bed bed3+
143
bed bed9
50
bigWig
2
bigBed bed9
Organism
731
Homo sapiens
Biosample type
561
tissue
97
primary cell
72
cell line
1
in vitro differentiated cells
Organ
600
epithelium
423
brain
387
connective tissue
387
kidney
367
musculature of body
309
lung
283
intestine
237
limb
229
heart
217
bodily fluid
206
blood
205
embryo
204
vasculature
199
skin of body
186
pancreas
170
large intestine
159
blood vessel
145
extraembryonic component
124
liver
116
stomach
107
eye
87
mammary gland
85
bone element
83
small intestine
80
uterus
76
prostate gland
72
placenta
71
adrenal gland
69
adipose tissue
64
penis
64
ureter
62
lymph node
60
artery
49
thymus
45
gonad
41
spinal cord
40
esophagus
32
spleen
23
lymphoid tissue
23
testis
22
nerve
21
ovary
21
thyroid gland
21
vein
18
skeleton
17
mouth
16
bronchus
16
lymphatic vessel
13
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
703
AMP
28
ENCODE
Genome assembly (visualization)
731
hg19
205
GRCh38
BIOSAMPLE
TYPE
731 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
variant allelic effects
histone modifications
binding sites
eQTL
tissue
kidney
29
14
16
10
1
2
1
1
small intestine
29
17
15
1
large intestine
27
14
13
1
1
right kidney
20
10
10
1
renal cortex interstitium
20
9
9
1
1
+ See 32 more…
primary cell
kidney tubule cell
3
2
2
2
epithelial cell of proximal tubule
2
1
1
1
1
1
renal cortical epithelial cell
2
1
1
2
1
colon epithelial cell
3
3
enterocyte
3
3
+ See 23 more…
cell line
HEK293
3
1
1
1
1
2
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
ACHN
2
1
1
1
+ See 12 more…
in vitro differentiated cells
renal cell carcinoma
1
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