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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
66
accessible chromatin
54
candidate regulatory elements
30
target gene predictions
27
chromatin state
14
binding sites
12
histone modifications
3
variant allelic effects
Date released
81
September, 2022
51
February, 2021
24
February, 2023
22
November, 2022
13
June, 2020
4
November, 2021
3
February, 2024
2
January, 2020
2
May, 2020
2
May, 2021
2
October, 2022
Available data
179
bed bed3+
36
bigWig
27
bed bed9
Organism
206
Homo sapiens
Biosample type
98
tissue
69
cell line
33
primary cell
6
in vitro differentiated cells
Organ
610
epithelium
423
brain
395
connective tissue
387
kidney
367
musculature of body
309
lung
283
intestine
237
limb
231
heart
217
bodily fluid
207
vasculature
206
blood
205
embryo
199
skin of body
186
pancreas
170
large intestine
159
blood vessel
145
extraembryonic component
126
liver
116
stomach
107
eye
87
mammary gland
85
bone element
83
small intestine
80
uterus
76
prostate gland
72
placenta
71
adrenal gland
69
adipose tissue
64
penis
64
ureter
62
lymph node
60
artery
49
thymus
45
gonad
41
spinal cord
40
esophagus
32
spleen
23
lymphoid tissue
23
testis
22
nerve
21
ovary
21
thyroid gland
21
vein
19
lymphatic vessel
18
skeleton
17
mouth
16
bronchus
13
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
202
AMP
4
ENCODE
Genome assembly (visualization)
206
hg19
36
GRCh38
BIOSAMPLE
TYPE
206 results
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accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
variant allelic effects
tissue
retina
23
6
3
3
1
1
1
pigmented layer of retina
20
Peyer's patch
1
7
3
3
prostate gland
1
4
2
2
2
2
eye
1
4
2
2
+ See 2 more…
cell line
22Rv1
4
2
2
1
1
WERI-Rb-1
1
2
1
1
2
1
LNCaP clone FGC
3
2
2
PC-3
1
2
1
1
1
1
RWPE1
1
2
1
1
1
1
+ See 9 more…
primary cell
retinal pigment epithelial cell
3
2
1
1
2
1
epithelial cell of prostate
4
3
2
iris pigment epithelial cell
1
2
1
1
fibroblast of the conjunctiva
2
1
1
Muller cell
2
+ See 3 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
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