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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
DNase-seq
48
ChIP-seq
8
ATAC-seq
4
total RNA-seq
Assay category
62
DNA accessibility
48
DNA binding
4
Transcription
Target of assay
48
histone
48
histone modification
34
broad histone mark
14
narrow histone mark
Date released
52
October, 2019
50
June, 2019
6
February, 2021
6
May, 2019
Available data
114
bam
110
bed narrowPeak
108
bigWig
102
bigBed narrowPeak
54
bed bed3+
54
bed broadPeak
54
bigBed broadPeak
4
tsv
Organism
114
Homo sapiens
Biosample type
114
tissue
Organ
658
pancreas
625
liver
589
connective tissue
426
adipose tissue
311
epithelium
188
heart
165
vasculature
164
brain
159
blood vessel
129
kidney
96
limb
93
artery
73
musculature of body
70
bone element
55
blood
55
bodily fluid
34
eye
31
nerve
29
embryo
18
ureter
17
vein
14
spleen
12
skeleton
2
pericardium
1
pituitary gland
0
intestine
Project
114
AMP
Genome assembly (visualization)
114
GRCh38
114
hg19
Lab
114
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
114 results
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DNase-seq
ChIP-seq
ATAC-seq
total RNA-seq
tissue
tibial nerve
2
24
1
4
tibial artery
2
18
1
muscle of leg
13
6
muscle of arm
17
renal pelvis
10
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