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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
85
candidate regulatory elements
56
target gene predictions
46
chromatin state
13
binding sites
12
accessible chromatin
6
histone modifications
1
variant allelic effects
Date released
132
September, 2022
57
February, 2021
11
November, 2021
6
June, 2020
4
May, 2021
3
October, 2022
2
August, 2017
2
March, 2020
1
February, 2024
1
May, 2020
Available data
175
bed bed3+
44
bed bed9
6
bigWig
Organism
219
Homo sapiens
Biosample type
129
tissue
51
primary cell
36
cell line
3
in vitro differentiated cells
Organ
610
epithelium
423
brain
395
connective tissue
387
kidney
367
musculature of body
309
lung
283
intestine
237
limb
231
heart
217
bodily fluid
207
vasculature
206
blood
205
embryo
199
skin of body
186
pancreas
170
large intestine
159
blood vessel
145
extraembryonic component
126
liver
116
stomach
107
eye
87
mammary gland
85
bone element
83
small intestine
80
uterus
76
prostate gland
72
placenta
71
adrenal gland
69
adipose tissue
64
penis
64
ureter
62
lymph node
60
artery
49
thymus
45
gonad
41
spinal cord
40
esophagus
32
spleen
23
lymphoid tissue
23
testis
22
nerve
21
ovary
21
thyroid gland
21
vein
19
lymphatic vessel
18
skeleton
17
mouth
16
bronchus
13
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
208
AMP
11
ENCODE
Genome assembly (visualization)
219
hg19
56
GRCh38
BIOSAMPLE
TYPE
219 results
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candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
histone modifications
variant allelic effects
tissue
small intestine
29
17
15
1
thymus
20
14
11
1
1
1
duodenal mucosa
4
2
3
muscle layer of duodenum
4
2
2
mammary gland
1
1
primary cell
mammary gland epithelial cell
3
4
3
1
1
1
mammary epithelial cell
3
1
1
4
1
fibroblast of mammary gland
2
1
1
2
1
1
myoepithelial cell of mammary gland
4
2
2
luminal epithelial cell of mammary gland
1
3
1
2
+ See 3 more…
cell line
MCF-7
9
6
5
3
1
2
T47D
3
2
2
MCF 10A
3
in vitro differentiated cells
mammary gland epithelial cell
1
1
1
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