Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 75candidate regulatory elements
  • 44target gene predictions
  • 35chromatin state
  • 18binding sites
  • 13accessible chromatin
  • 13histone modifications
  • 1variant allelic effects
Date released
  • 102September, 2022
  • 68February, 2021
  • 10November, 2021
  • 8June, 2020
  • 5May, 2021
  • 4October, 2022
  • 1August, 2017
  • 1February, 2024
Available data
  • 165bed bed3+
  • 34bed bed9
  • 5bigWig
Organism
  • 199Homo sapiens
Collection Tags
  • 102EpiMap
  • 45ENCODE
  • 35ChIP-Atlas
  • 10AMP
  • 10T2DKP
  • 6DGA
Biosample type
  • 100primary cell
  • 70cell line
  • 20tissue
  • 9in vitro differentiated cells
Organ
  • 609epithelium
  • 423brain
  • 395connective tissue
  • 387kidney
  • 367musculature of body
  • 309lung
  • 283intestine
  • 237limb
  • 231heart
  • 217bodily fluid
  • 207vasculature
  • 206blood
  • 205embryo
  • 199skin of body
  • 186pancreas
  • 170large intestine
  • 159blood vessel
  • 145extraembryonic component
  • 126liver
  • 116stomach
  • 107eye
  • 87mammary gland
  • 85bone element
  • 83small intestine
  • 80uterus
  • 76prostate gland
  • 72placenta
  • 71adrenal gland
  • 69adipose tissue
  • 64penis
  • 64ureter
  • 62lymph node
  • 60artery
  • 49thymus
  • 45gonad
  • 41spinal cord
  • 40esophagus
  • 32spleen
  • 23lymphoid tissue
  • 23testis
  • 22nerve
  • 21ovary
  • 21thyroid gland
  • 21vein
  • 19lymphatic vessel
  • 18skeleton
  • 17mouth
  • 16bronchus
  • 13bone marrow
  • 11breast
  • 11pituitary gland
  • 9tongue
  • 9urinary bladder
  • 8vagina
  • 5trachea
  • 4nose
Project
  • 189AMP
  • 10ENCODE
Genome assembly (visualization)
  • 199hg19
  • 47GRCh38
BIOSAMPLE
TYPE

199 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
histone modifications
variant allelic effects
primary cell
foreskin keratinocyte1144
keratinocyte3531221
foreskin fibroblast621412
fibroblast of dermis4431
dermis blood vessel endothelial cell622
cell line
GM23248211111
RPMI79512111
SK-MEL-52111
iPS DF 19.11221
iPS DF 19.7211
tissue
lower leg skin622
skin of body111
suprapubic skin3
skin of forearm11
skin of prepuce of penis11
in vitro differentiated cells
foreskin keratinocyte111
iPS DF 4.7 Cell Line111
dermis microvascular lymphatic vessel endothelial cell11
skin fibroblast1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego