Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
59
total RNA-seq
8
single cell RNA-seq
1
MPRA
Assay category
67
Transcription
Date released
84
February, 2021
57
August, 2021
6
May, 2022
4
February, 2023
1
October, 2022
Available data
2790
bam
2611
bigWig
1534
bed narrowPeak
1309
tsv
952
fastq
945
bigBed narrowPeak
354
tagAlign
281
bed broadPeak
244
bigBed broadPeak
208
bed bed3+
152
txt
73
zippedFastqFolder
64
xls
30
bed bedMethyl
30
bigBed bedMethyl
13
hic
11
bedpe bed3+
7
bed bed3
3
csv
3
hdf5
3
tar
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
151
Homo sapiens
Biosample type
151
tissue
in vitro differentiated cells
1
cell line
Organ
88
bone element
57
kidney
6
pancreas
4
skeleton
Project
152
AMP
Lab
89
AMP-T2D consortium
57
Katalin Susztak, Upenn
6
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
audit script error
audit.ERROR.category!
audit script error
biosample_type!
in vitro differentiated cells
organ_slims!
epithelium
ureter
BIOSAMPLE
ASSAY
152 results
search-icon
table-tab-icon
Clear Filters
RNA microarray
total RNA-seq
single cell RNA-seq
MPRA
tissue
bone element
84
kidney
49
8
islet of Langerhans
6
acetabular part of hip bone
1
ilium
1
+ See 2 more…
cell line
MIN6
1
See all biosamples
Download