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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
52
single cell RNA-seq
41
WGBS
39
ATAC-seq
21
snATAC-seq
Assay category
60
DNA accessibility
52
Transcription
41
DNA methylation
Date released
134
May, 2022
19
September, 2020
Available data
2883
bam
2700
bigWig
1475
bed narrowPeak
1462
tsv
1190
fastq
815
bigBed narrowPeak
358
tagAlign
153
zippedFastqFolder
152
txt
134
bed broadPeak
97
bigBed broadPeak
64
xls
60
bed bed3+
36
bed bedMethyl
36
bigBed bedMethyl
15
hic
13
bedpe bed3+
7
bed bed3
5
hdf5
4
tar
3
csv
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
153
Homo sapiens
Biosample type
153
primary cell
Organ
80
epithelium
80
pancreas
Project
153
HPAP
Lab
153
Klaus Kaestner, Upenn
audit.ERROR.category!
audit script error
biosample_type!
in vitro differentiated cells
month_released!
June, 2019
September, 2023
BIOSAMPLE
ASSAY
153 results
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single cell RNA-seq
WGBS
ATAC-seq
snATAC-seq
primary cell
Langerhans cell
52
21
pancreatic alpha cell
25
22
pancreatic beta cell
16
13
pancreatic acinar cell
4
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