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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
ChIP-seq
5
MeRIP-seq
Assay category
24
DNA binding
Target of assay
178
histone
178
histone modification
91
broad histone mark
87
narrow histone mark
29
control
17
transcription factor
6
RNA binding protein
5
nucleotide modification
Date released
19
August, 2017
May, 2021
5
November, 2020
4
August, 2021
1
October, 2017
Available data
bam
168
fastq
67
tagAlign
20
bigWig
9
bed bed3+
3
tsv
Organism
29
Homo sapiens
Biosample type
20
tissue
7
cell line
2
in vitro differentiated cells
Organ
11
pancreas
7
connective tissue
7
liver
5
adipose tissue
3
epithelium
3
musculature of body
1
brain
Project
29
AMP
Lab
20
AMP-T2D consortium
5
Rohit N. Kulkarni, M.D., Ph.D.
4
Bing Ren, UCSD
Audit category:
3
inconsistent ontology term
audit.ERROR.category!
audit script error
files.file_type!
bam
month_released!
May, 2021
September, 2018
BIOSAMPLE
ASSAY
29 results
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Clear Filters
ChIP-seq
MeRIP-seq
tissue
islet of Langerhans
6
2
subcutaneous abdominal adipose tissue
5
liver
3
skeletal muscle tissue
3
brain
1
cell line
HepG2
4
EndoC_BH1
3
in vitro differentiated cells
adipocyte
2
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