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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
13
single cell RNA-seq
6
WGBS
4
ATAC-seq
3
snDrop-seq
1
pCHi-C
Assay category
13
Transcription
6
DNA methylation
4
DNA accessibility
Date released
270
August, 2021
205
February, 2023
175
May, 2022
August, 2017
122
May, 2021
111
February, 2021
63
October, 2019
59
September, 2020
58
May, 2020
47
March, 2020
47
September, 2023
40
May, 2024
26
July, 2019
25
February, 2020
16
January, 2021
15
May, 2023
14
November, 2017
10
November, 2020
8
January, 2018
8
October, 2017
7
August, 2020
5
March, 2023
4
July, 2018
4
March, 2019
2
November, 2019
1
April, 2019
1
August, 2018
1
December, 2018
1
December, 2019
1
November, 2018
1
October, 2022
1
September, 2018
Available data
bam
554
tsv
551
bigWig
84
txt
23
bed narrowPeak
18
fastq
8
tagAlign
4
bed bedgraph
2
bed bed3
2
bed bed3+
1
csv
Organism
111
Homo sapiens
Biosample type
88
tissue
18
primary cell
4
in vitro differentiated cells
1
cell line
Organ
84
bone element
6
epithelium
6
pancreas
4
connective tissue
3
kidney
2
liver
Project
93
AMP
18
HPAP
Genome assembly (visualization)
5
hg19
Lab
93
AMP-T2D consortium
18
Klaus Kaestner, Upenn
Audit category:
84
inconsistent ontology term
audit script error
audit.ERROR.category!
audit script error
files.file_type!
bam
month_released!
August, 2017
organ_slims!
lung
BIOSAMPLE
ASSAY
111 results
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Clear Filters
RNA microarray
single cell RNA-seq
WGBS
ATAC-seq
snDrop-seq
pCHi-C
tissue
bone element
84
kidney (Cortex-Medulla)
1
kidney (cortex)
1
kidney (medulla)
1
liver
1
primary cell
Langerhans cell
12
pancreatic alpha cell
6
in vitro differentiated cells
adipocyte
4
cell line
HepG2
1
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