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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
RRBS
12
WGBS
6
ATAC-seq
4
Hi-C
4
total RNA-seq
2
FAIRE-seq
Assay category
27
DNA methylation
8
DNA accessibility
4
3D chromatin structure
4
Transcription
Date released
406
November, 2017
289
August, 2017
289
October, 2019
224
May, 2021
199
May, 2022
191
August, 2021
185
February, 2023
152
May, 2020
127
February, 2021
120
May, 2019
80
April, 2019
79
December, 2017
79
November, 2018
74
October, 2018
59
September, 2020
47
September, 2018
47
September, 2023
41
November, 2019
40
May, 2024
39
July, 2019
35
December, 2018
31
June, 2019
25
January, 2019
24
February, 2018
23
October, 2017
19
April, 2020
19
March, 2020
16
January, 2021
15
May, 2023
11
November, 2020
9
September, 2017
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
July, 2018
1
August, 2018
1
December, 2019
1
October, 2022
Available data
249
bigWig
246
bam
tsv
50
fastq
23
bed bedMethyl
23
bigBed bedMethyl
7
bed narrowPeak
bed bed3+
4
hdf5
2
bigBed narrowPeak
Organism
43
Homo sapiens
Biosample type
34
tissue
9
primary cell
Organ
14
heart
6
epithelium
6
musculature of body
6
pancreas
5
kidney
5
limb
5
vasculature
4
blood vessel
4
brain
2
liver
1
artery
1
connective tissue
1
eye
1
pericardium
Project
43
AMP
Genome assembly (visualization)
22
hg19
14
GRCh38
Lab
43
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
audit.ERROR.category!
audit script error
files.file_type!
bed bed3+
tsv
BIOSAMPLE
ASSAY
43 results
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Clear Filters
RRBS
WGBS
ATAC-seq
Hi-C
total RNA-seq
FAIRE-seq
tissue
heart left ventricle
1
4
2
islet of Langerhans
1
4
gastrocnemius medialis
4
aorta
2
heart right ventricle
2
+ See 13 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 4 more…
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