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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
2
WGBS
1
ATAC-seq
1
pCHi-C
Assay category
20
DNA binding
2
DNA methylation
1
DNA accessibility
Target of assay
8
control
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
8
November, 2018
7
December, 2018
7
January, 2019
1
March, 2020
1
October, 2017
Available data
24
bam
24
fastq
16
bigWig
14
bed narrowPeak
13
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
bed broadPeak
bigBed broadPeak
1
tsv
Organism
24
Homo sapiens
Biosample type
24
tissue
Organ
860
pancreas
728
liver
672
connective tissue
488
adipose tissue
471
epithelium
360
heart
269
kidney
239
brain
218
vasculature
216
blood vessel
158
bone element
137
artery
86
limb
69
blood
69
bodily fluid
57
eye
49
musculature of body
41
nerve
35
embryo
24
spleen
20
lung
17
vein
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
thymus
1
urinary bladder
Project
24
AMP
Genome assembly (visualization)
15
GRCh38
13
hg19
Lab
24
AMP-T2D consortium
audit.ERROR.category!
audit script error
files.file_type!
bed broadPeak
bigBed broadPeak
month_released!
May, 2021
BIOSAMPLE
ASSAY
24 results
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ChIP-seq
WGBS
ATAC-seq
pCHi-C
tissue
spleen
20
2
1
1
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