Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
19
total RNA-seq
5
ChIP-seq
4
pCHi-C
1
RRBS
Assay category
28
DNA accessibility
19
Transcription
5
DNA binding
1
DNA methylation
Target of assay
3
histone
3
histone modification
3
narrow histone mark
1
RNA binding protein
1
control
1
transcription factor
Date released
31
February, 2023
21
October, 2019
3
June, 2019
1
February, 2020
1
July, 2019
Available data
33
bed narrowPeak
7
bam
6
bigBed narrowPeak
6
bigWig
5
tsv
4
bed bed3+
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
57
Homo sapiens
Biosample type
53
tissue
4
primary cell
Organ
921
pancreas
728
liver
674
connective tissue
497
epithelium
488
adipose tissue
363
heart
269
kidney
239
brain
218
vasculature
216
blood vessel
159
bone element
137
artery
86
limb
69
blood
69
bodily fluid
57
eye
49
musculature of body
41
nerve
37
embryo
24
spleen
20
lung
17
vein
16
skeleton
5
gonad
5
ovary
2
intestine
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
57
AMP
Genome assembly (visualization)
30
hg19
2
GRCh38
Lab
57
AMP-T2D consortium
audit.ERROR.category!
audit script error
files.file_type!
bed broadPeak
organ_slims!
pericardium
BIOSAMPLE
ASSAY
57 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
pCHi-C
RRBS
tissue
islet of Langerhans
1
14
2
4
retina
15
3
pigmented layer of retina
12
2
primary cell
retinal pigment epithelial cell
3
1
Download