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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
snATAC-seq
1
ATAC-seq
1
pCHi-C
Assay category
9
DNA accessibility
Date released
8
January, 2021
1
January, 2018
1
March, 2020
Available data
60
bam
fastq
55
bigWig
54
bed narrowPeak
54
bigBed narrowPeak
1
tsv
Organism
10
Homo sapiens
Biosample type
8
primary cell
1
cell line
1
tissue
Organ
583
connective tissue
471
pancreas
447
adipose tissue
393
heart
347
kidney
326
liver
262
epithelium
259
brain
229
vasculature
226
blood vessel
159
bone element
141
artery
122
limb
93
musculature of body
61
eye
43
nerve
21
vein
20
lung
18
ureter
16
skeleton
10
embryo
9
blood
9
bodily fluid
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
8
T1D
2
AMP
Genome assembly (visualization)
1
hg19
Lab
8
Kyle Gaulton, UCSD
2
AMP-T2D consortium
audit.ERROR.category!
audit script error
files.file_type!
fastq
month_released!
October, 2017
BIOSAMPLE
ASSAY
10 results
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snATAC-seq
ATAC-seq
pCHi-C
primary cell
peripheral blood mononuclear cell
8
cell line
GM12878
1
tissue
esophagus
1
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